@prefix this: <https://w3id.org/np/RAp_WPbWfj7pnWVnvYCCvipcMzQ03G7amR3AR8RIpvCF8> .
@prefix sub: <https://w3id.org/np/RAp_WPbWfj7pnWVnvYCCvipcMzQ03G7amR3AR8RIpvCF8/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix biolink: <https://w3id.org/biolink/vocab/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .
@prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/> .
@prefix cb: <https://w3id.org/spaces/carabid-beetles/r/ontology/> .

sub:Head {
  this: np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo;
    a np:Nanopublication .
}

sub:assertion {
  rdf:type rdfs:label "is an" .
  
  rdfs:comment rdfs:label "has the free-text comment" .
  
  biolink:object rdfs:label "links the taxon to the chorotype" .
  
  biolink:predicate rdfs:label "has the relation" .
  
  biolink:subject rdfs:label "refers to" .
  
  biodiv:hasSubjectLifeCycleStage rdfs:label "refers to the taxon's life cycle stage" .
  
  biodiv:hasTaxonConceptDefinition rdfs:label "is used as defined in" .
  
  biodiv:hasTaxonName rdfs:label "has the name - links a taxon usage to a taxon name" .
  
  sub:assertion dct:description "Such a nanopublication expresses an association between an organism taxon (e.g. a species) and a chorotype, for example expressing that the organisms of the given species have a distribution range matching the specified chorotype.";
    a nt:AssertionTemplate;
    rdfs:label "Expressing an association between an organism taxon and a chorotype";
    nt:hasDefaultProvenance <http://purl.org/np/RA2VjRiJ5AsNnPHDXuOqvsEJwTwqtj5rBb-OFkpPOzd9s>;
    nt:hasNanopubLabelPattern "${taxonname} - has distribution range - ${chorotype}";
    nt:hasStatement sub:st00, sub:st05, sub:st10, sub:st11, sub:st12, sub:st20, sub:st40,
      sub:st60;
    nt:hasTag "Biodiversity";
    nt:hasTargetNanopubType biodiv:BiodivNanopub .
  
  sub:association a nt:IntroducedResource, nt:LocalResource;
    rdfs:label "this association" .
  
  sub:chorotype a nt:GuidedChoicePlaceholder;
    rdfs:label "the chorotype to be associated with the taxon";
    nt:possibleValuesFromApi "https://w3id.org/np/l/nanopub-query-1.1/api/RAyMrQ89RECTi9gZK5q7gjL1wKTiP8StkLy0NIkkCiyew/find-things?type=https%3A%2F%2Fw3id.org%2Fspaces%2Fcarabid-beetles%2Fr%2Fontology%2FChorotype&searchterm=" .
  
  sub:comment a nt:LongLiteralPlaceholder;
    rdfs:label "short explanation related to the above statement" .
  
  sub:lifecyclestage a nt:RestrictedChoicePlaceholder;
    rdfs:label "the life cycle stage";
    nt:possibleValuesFrom <http://purl.org/np/RAVZS2MV-siFEqsgFTtgSoKA5qJkp7r1nM_n-MqPkvgdE> .
  
  sub:st00 rdf:object cb:OrganismTaxonToChorotypeAssociation;
    rdf:predicate rdf:type;
    rdf:subject sub:association .
  
  sub:st05 rdf:object cb:hasDistributionRange;
    rdf:predicate biolink:predicate;
    rdf:subject sub:association .
  
  sub:st10 rdf:object sub:taxon;
    rdf:predicate biolink:subject;
    rdf:subject sub:association .
  
  sub:st11 rdf:object sub:taxonname;
    rdf:predicate biodiv:hasTaxonName;
    rdf:subject sub:taxon .
  
  sub:st12 rdf:object sub:taxondef;
    rdf:predicate biodiv:hasTaxonConceptDefinition;
    rdf:subject sub:taxon;
    a nt:OptionalStatement .
  
  sub:st20 rdf:object sub:lifecyclestage;
    rdf:predicate biodiv:hasSubjectLifeCycleStage;
    rdf:subject sub:association;
    a nt:OptionalStatement .
  
  sub:st40 rdf:object sub:chorotype;
    rdf:predicate biolink:object;
    rdf:subject sub:association .
  
  sub:st60 rdf:object sub:comment;
    rdf:predicate rdfs:comment;
    rdf:subject sub:association;
    a nt:OptionalStatement .
  
  sub:taxon a nt:LocalResource;
    rdfs:label "a taxon concept" .
  
  sub:taxondef a nt:ExternalUriPlaceholder;
    rdfs:label "publication DOI (https://doi.org/...) or taxon treatment ID (https://treatment.plazi.org/id/...)";
    nt:hasRegex "(https://doi.org/|https://treatment.plazi.org/id/).+" .
  
  sub:taxonname a nt:GuidedChoicePlaceholder;
    rdfs:label "search and select from list (if not found, paste identifying URI from IPNI, MycoBank, Index Fungorum, or Zoobank)";
    nt:possibleValuesFromApi "https://vodex.petapico.org/nidx/query?rows=100&q=label:" .
  
  cb:OrganismTaxonToChorotypeAssociation rdfs:label "association of an organism taxon to a chorotype" .
  
  cb:hasDistributionRange rdfs:label "has distribution range" .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  orcid:0000-0002-1267-0234 foaf:name "Tobias Kuhn" .
  
  this: dct:created "2026-03-19T16:16:15Z"^^xsd:dateTime;
    dct:creator orcid:0000-0002-1267-0234;
    dct:license <https://creativecommons.org/licenses/by/4.0/>;
    npx:introduces sub:assertion;
    rdfs:label "Template: Expressing an association between an organism taxon and a chorotype";
    nt:wasCreatedFromProvenanceTemplate <http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM>;
    nt:wasCreatedFromPubinfoTemplate <http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM>,
      <http://purl.org/np/RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90>, <http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI>;
    nt:wasCreatedFromTemplate <http://purl.org/np/RAJwu5sVubRqXY4t2gkSoGxWkMyZqnpkGTCPiTlmvi4so> .
  
  sub:sig npx:hasAlgorithm "RSA";
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQCwUtewGCpT5vIfXYE1bmf/Uqu1ojqnWdYxv+ySO80ul8Gu7m8KoyPAwuvaPj0lvPtHrg000qMmkxzKhYknEjq8v7EerxZNYp5B3/3+5ZpuWOYAs78UnQVjbHSmDdmryr4D4VvvNIiUmd0yxci47dTFUj4DvfHnGd6hVe5+goqdcwIDAQAB";
    npx:hasSignature "VwZnfzDlCiEpqSEk6BB7gAfpoLpSiNKma3oaFYfj6Z1B0FXbUNi6e7qzwDiGLfO1WoNQ8Ua8Hy6oS9xIkpnBzB7TBI4CW6fgGVitHnBkk+frgFCoEtVFhKBzSKJtpUiGBVq4/v5IJNsFZuCz+qjy7O+NEwon7Qwu412b2siiFk8=";
    npx:hasSignatureTarget this:;
    npx:signedBy orcid:0000-0002-1267-0234 .
}