Nanopublications

@prefix this: <https://w3id.org/np/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg> .
@prefix sub: <https://w3id.org/np/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg/> .
@prefix schema: <http://schema.org/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix edam: <http://edamontology.org/> .
@prefix pav: <http://purl.org/pav/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix sio: <http://semanticscience.org/resource/> .
@prefix bibo: <http://purl.org/ontology/bibo/> .
@prefix prov: <http://www.w3.org/ns/prov#> .

sub:Head {
  this: np:hasAssertion sub:assertion ;
    np:hasProvenance sub:provenance ;
    np:hasPublicationInfo sub:pubinfo ;
    a np:Nanopublication .
}

sub:assertion {
  <https://coxbase.q-gaps.de> edam:has_function edam:operation_0567 , edam:operation_3196 ;
    edam:has_topic edam:topic_0622 , edam:topic_3053 , edam:topic_3301 , edam:topic_3673 ;
    schema:alternateName "CoxBase: Online Platform for Coxiella burnetii Genomic Sequences"@en ;
    schema:applicationCategory "Bioinformatics"@en , "Epidemiological surveillance"@en ;
    schema:codeRepository <https://github.com/foerstner-lab/CoxBase-Webapp> ;
    schema:description "First platform to combine all disparate genotyping systems for Coxiella burnetii including MLVA, MST, IS1111, adaA and plasmid typing methods"@en ;
    schema:featureList "Genotyping"@en , "Geographic mapping"@en , "Metadata visualization"@en , "Phylogenetic analysis"@en ;
    schema:license "Open source"@en ;
    schema:name "CoxBase"@en ;
    schema:operatingSystem "Web-based"@en ;
    schema:programmingLanguage "JavaScript"@en , "Python"@en ;
    schema:provider <https://ror.org/01js2sh04> ;
    schema:softwareVersion "1.0"@en ;
    schema:url <https://coxbase.q-gaps.de> ;
    sio:SIO_000216 400 ;
    a edam:data_0957 , schema:SoftwareApplication .
}

sub:provenance {
  <https://doi.org/10.1128/mSystems.00403-21> bibo:doi "10.1128/mSystems.00403-21" ;
    schema:author orcid:0000-0002-1481-2996 ;
    schema:datePublished "2021"^^xsd:gYear ;
    schema:isPartOf sub:__1 ;
    schema:name "CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences"@en ;
    a bibo:AcademicArticle , schema:ScholarlyArticle .
  sub:__1 schema:issn "2379-5077" ;
    schema:name "mSystems"@en ;
    a schema:Periodical .
  sub:assertion prov:wasAttributedTo orcid:0000-0002-1481-2996 ;
    prov:wasDerivedFrom <https://doi.org/10.1128/mSystems.00403-21> .
}

sub:pubinfo {
  this: dct:created "2026-01-10T22:00:00Z"^^xsd:dateTime ;
    dct:license <https://creativecommons.org/publicdomain/zero/1.0/> ;
    pav:createdBy orcid:0009-0005-7752-8203 ;
    a npx:ExampleNanopub ;
    rdfs:comment "This nanopublication describes CoxBase, the first comprehensive online platform combining five genotyping methods for epidemiological surveillance and analysis of Coxiella burnetii"@en ;
    rdfs:label "Nanopublication: CoxBase as first integrated platform for Coxiella burnetii genotyping"@en ;
    prov:wasAttributedTo orcid:0009-0005-7752-8203 .
  sub:sig npx:hasAlgorithm "RSA" ;
    npx:hasPublicKey "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB" ;
    npx:hasSignature "jfsnB3Dh5Nc10ke8RT/XLEIpKfNM6NsfArMY2KxpZC5IlB74aYfx2axTVsRHkkjYfnjViWL9b85iB9Syhtp9/yb25w052EHA+TfTopzUAtw+E9Q/0pzotzK9J1YYy48sGBkCVvwyzBoj2Si9BIKaQDbmdTFNx5Gr/zOOY/5LqaQvn61O+cOaCKaawJeDb8ZwEjYUiAjoM7ZIBHy00i/Etz7K0qdrerqHIHD6pa+wes1ZeMosochkZY7hqHtZGyVkY7rXWYC/7HpezBZrvbWHjn+s5ON91G4eElGhVj9LoQI7xTFyFc9FrA6bM6/zwWiUeGRI7gT3w8h9fVVPXt3tgA==" ;
    npx:hasSignatureTarget this: .
}