Nanopublications

@prefix this: <https://w3id.org/np/RAm6IS2F4q8Y2vNP7XlhGbUUE7OLW60mXUYJ7mgjAbUXE> .
@prefix sub: <https://w3id.org/np/RAm6IS2F4q8Y2vNP7XlhGbUUE7OLW60mXUYJ7mgjAbUXE/> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix dct: <http://purl.org/dc/terms/> .
@prefix nt: <https://w3id.org/np/o/ntemplate/> .
@prefix npx: <http://purl.org/nanopub/x/> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix orcid: <https://orcid.org/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix foaf: <http://xmlns.com/foaf/0.1/> .

sub:Head {
  this: np:hasAssertion sub:assertion ;
    np:hasProvenance sub:provenance ;
    np:hasPublicationInfo sub:pubinfo ;
    a np:Nanopublication .
}

sub:assertion {
  sub:get-urban-organism-associations dct:description "This query returns all organism associations to the environment of \"city\"." ;
    dct:license <http://www.apache.org/licenses/LICENSE-2.0> ;
    a <https://w3id.org/kpxl/grlc/grlc-query> ;
    rdfs:label "Get urban organism associations" ;
    <https://w3id.org/kpxl/grlc/endpoint> <https://w3id.org/np/l/nanopub-query-1.1/repo/type/c00cb1067aea80b382c09acc506ffa422a016b2ec3354bd6fc77335a44b1b4b5> ;
    <https://w3id.org/kpxl/grlc/sparql> """prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#>
prefix dct: <http://purl.org/dc/terms/>
prefix np: <http://www.nanopub.org/nschema#>
prefix npa: <http://purl.org/nanopub/admin/>
prefix npx: <http://purl.org/nanopub/x/>
prefix biolink: <https://w3id.org/biolink/vocab/>
prefix biodiv: <https://w3id.org/kpxl/biodiv/terms/>
prefix nt: <https://w3id.org/np/o/ntemplate/>

select ?relation ?relation_label ?taxon_name ?taxon_name_label ?creator ?date ?np (\"^\" as ?np_label) where {
graph npa:graph {
?np npx:hasNanopubType biodiv:OrganismToEnvironmentAssociation .
?np npa:hasValidSignatureForPublicKey ?pubkey .
filter not exists { ?npx npx:invalidates ?np ; npa:hasValidSignatureForPublicKey ?pubkey . }
?np dct:created ?date .
?np dct:creator ?creator .
?np np:hasAssertion ?a .
?np np:hasPublicationInfo ?i .
optional { ?np rdfs:label ?label }
}
graph ?a {
?association a biodiv:OrganismToEnvironmentAssociation .
?association biolink:subject ?organism .
?organism a ?taxonConcept .
?taxonConcept biodiv:hasTaxonName ?taxon_name .
?association biolink:predicate ?relation .
?association biolink:object <http://purl.obolibrary.org/obo/ENVO_00000856> .
}
optional { graph ?i { ?taxon_name nt:hasLabelFromApi ?taxon_name_label . } }
optional { graph ?i { ?relation nt:hasLabelFromApi ?relation_label . } }
optional { graph ?i { values (?relation ?relation_label) { ( <http://purl.obolibrary.org/obo/RO_0002303> \"has habitat\" ) } } }
}
order by desc(?date)""" .
}

sub:provenance {
sub:assertion prov:wasAttributedTo orcid:0000-0002-1267-0234 .
}

sub:pubinfo {
  orcid:0000-0002-1267-0234 foaf:name "Tobias Kuhn" .
  this: dct:created "2026-02-09T11:01:56.528Z"^^xsd:dateTime ;
    dct:creator orcid:0000-0002-1267-0234 ;
    dct:license <https://creativecommons.org/licenses/by/4.0/> ;
    npx:embeds sub:get-urban-organism-associations ;
    npx:wasCreatedAt <https://nanodash.knowledgepixels.com/> ;
    nt:wasCreatedFromProvenanceTemplate <https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU> ;
    nt:wasCreatedFromPubinfoTemplate <https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw> , <https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI> ;
    nt:wasCreatedFromTemplate <https://w3id.org/np/RAEFAt-QcFK0ZhqfvlsmS10BnzGJA0xwOICZXkO-ai87k> .
  sub:sig npx:hasAlgorithm "RSA" ;
    npx:hasPublicKey "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB" ;
    npx:hasSignature "gPA4X59d4EhGdpkFU//RcXmGp6slrUGhRlVY7Ho18BoAxg0a8cbYYhOxswCy78thsCH30XUL/SKp6XUpfwSsCUQ1MuANLsEsKltxzlDmCZcEiFdoRgm36F+xSrgQQ4AZWRgmTVhPTgBAjPoo4fvDq7uANiJCzEn9yQfphly7lqE=" ;
    npx:hasSignatureTarget this: ;
    npx:signedBy orcid:0000-0002-1267-0234 .
}