@prefix dct: <http://purl.org/dc/terms/> .
@prefix this: <http://purl.org/np/RAkMEKcTKlfvRF34_ZWckUYrkbrhw1lzHZ05QMWxC6W-k> .
@prefix sub: <http://purl.org/np/RAkMEKcTKlfvRF34_ZWckUYrkbrhw1lzHZ05QMWxC6W-k#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
@prefix pav: <http://purl.org/pav/> .
@prefix prov: <http://www.w3.org/ns/prov#> .
@prefix np: <http://www.nanopub.org/nschema#> .
@prefix orcid: <http://orcid.org/> .
@prefix analysis: <http://purl.org/fairified/pkd/#analysis/> .
@prefix experiment: <http://purl.org/fairified/pkd/#experiment/> .
@prefix atlas: <http://rdf.ebi.ac.uk/terms/atlas/> .
@prefix obo: <http://purl.obolibrary.org/obo/> .
@prefix geo: <https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=> .

sub:Head {
  this: np:hasAssertion sub:assertion;
    np:hasProvenance sub:provenance;
    np:hasPublicationInfo sub:pubinfo;
    a np:Nanopublication .
}

sub:assertion {
  analysis:1 dct:description "We introduce the PKD Signature, a set of 1,515 genes that are commonly dysregulated in PKD studies. We show that the signature genes include many known and novel PKD-related genes and functions. Moreover, genes with a role in injury repair, as evidenced by expression data and/or automated literature analysis, were significantly enriched in the PKD Signature, with 35% of the PKD Signature genes being directly implicated in injury repair.";
    atlas:isImplementedBy <https://bioconductor.org/packages/release/bioc/html/limma.html>;
    a atlas:DifferentialExpressionAnalysis;
    rdfs:seeAlso <https://doi.org/10.1152/ajprenal.00653.2016>;
    prov:used geo:GSE72554 .
  
  experiment:1 atlas:hasAnalysis analysis:1;
    atlas:isAbout obo:NCBITaxon_10090;
    a atlas:Experiment;
    rdfs:seeAlso <https://doi.org/10.1016/j.ebiom.2016.01.027> .
}

sub:provenance {
  sub:assertion prov:wasAttributedTo orcid:0000-0002-2759-8079, orcid:0000-0002-7990-1324 .
}

sub:pubinfo {
  this: dct:created "2017-05-18T14:02:00+02:00"^^xsd:dateTime;
    dct:license <https://creativecommons.org/share-your-work/public-domain/cc0/>;
    pav:createdBy orcid:0000-0002-1215-167X, orcid:0000-0002-1267-0234, orcid:0000-0002-2759-8079,
      orcid:0000-0002-7990-1324, orcid:0000-0003-4818-2360 .
}