@prefix this: <
https://w3id.org/np/RAeCxjIx0rgSY9AdOe-lum4Un1tmzE_1uaMAHAcxBxN6s
> .
@prefix sub: <
https://w3id.org/np/RAeCxjIx0rgSY9AdOe-lum4Un1tmzE_1uaMAHAcxBxN6s/
> .
@prefix schema: <
http://schema.org/
> .
@prefix np: <
http://www.nanopub.org/nschema#
> .
@prefix pav: <
http://purl.org/pav/
> .
@prefix xsd: <
http://www.w3.org/2001/XMLSchema#
> .
@prefix rdfs: <
http://www.w3.org/2000/01/rdf-schema#
> .
@prefix orcid: <
https://orcid.org/
> .
@prefix npx: <
http://purl.org/nanopub/x/
> .
@prefix bibo: <
http://purl.org/ontology/bibo/
> .
@prefix prov: <
http://www.w3.org/ns/prov#
> .
@prefix foaf: <
http://xmlns.com/foaf/0.1/
> .
@prefix dc: <
http://purl.org/dc/terms/
> .
sub:Head
{
this:
np:hasAssertion
sub:assertion
;
np:hasProvenance
sub:provenance
;
np:hasPublicationInfo
sub:pubinfo
;
a
np:Nanopublication
.
}
sub:assertion
{
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping
schema:description
"Automated genotyping from genomic sequences using computational methods"@en ;
a
schema:DefinedTerm
;
rdfs:label
"In Silico Genotyping"@en ;
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23IS1111Method
,
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23MLVAMethod
,
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23MSTMethod
,
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23PlasmidTypingMethod
,
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23adaAMethod
.
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoTypingClaim
schema:about
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping
;
schema:text
"In silico typing can be an indispensable tool for rapid genotyping of Coxiella genomic sequences"@en ;
a
schema:Statement
;
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23evidenceFrom
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23ValidationStudy
.
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23SequenceQualityClaim
schema:text
"The strength of in silico typing methods relies significantly on the quality of the input sequence"@en ;
a
schema:Statement
;
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23evidenceFrom
sub:RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23ValidationStudy
.
}
sub:provenance
{
<
https://doi.org/10.1128/mSystems.00403-21
>
bibo:doi
"10.1128/mSystems.00403-21" ;
schema:datePublished
"2021"^^
xsd:gYear
;
schema:name
"CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences"@en ;
a
bibo:AcademicArticle
.
sub:assertion
prov:wasAttributedTo
orcid:0000-0002-1481-2996
,
orcid:0000-0002-2498-4951
,
orcid:0000-0002-2864-3820
,
orcid:0000-0003-0913-194X
,
orcid:0000-0003-1886-7625
,
orcid:0000-0003-3012-2626
;
prov:wasDerivedFrom
<
https://doi.org/10.1128/mSystems.00403-21
> .
}
sub:pubinfo
{
orcid:0009-0005-7752-8203
foaf:name
"Tiado Kollender" .
this:
dc:created
"2026-01-11T12:00:00Z"^^
xsd:dateTime
;
dc:creator
orcid:0009-0005-7752-8203
;
dc:license
<
https://creativecommons.org/licenses/by/4.0/
> ;
npx:signedBy
orcid:0009-0005-7752-8203
;
npx:wasCreatedAt
<
https://nanodash.knowledgepixels.com/
> ;
pav:authoredBy
orcid:0009-0005-7752-8203
;
a
npx:ExampleNanopub
;
rdfs:comment
"Nanopublication describing the utility of in silico genotyping methods for rapid genotyping of Coxiella burnetii genomic sequences, covering MLVA, MST, IS1111, adaA and plasmid typing methods"@en ;
rdfs:label
"In Silico Genotyping of Coxiella burnetii" .
sub:sig
npx:hasAlgorithm
"RSA" ;
npx:hasPublicKey
"MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB" ;
npx:hasSignature
"Bo9SGa/dum4Wuc0h5bLfPEzOT8zhkD8wz7R5grBg87SA2GyzXuz/6DzcDEhSQ1SH0AlD48gOgR3bnIsDKv/cSBEt87NUPqVK9HFpLD3llUidrD5oxViGaUqYU8Yo3S+FujUV+8LD+g38eSPeMtBMFwxfnrWNHgvCBhDIapGN0q8YUNiDspic9zFEDnpijduSJVhr0SNzbO/PerKY2Q0o+QWjaQPtYwwzwpjBW+Y7FqtMFQIAChil6ABHgonckJyZDN2PVdnsGGHU6NVW+MPMmo79H7JcWvkCg1b6Y099hnrbcGhF3aw1QPnuvjlIQ9ooMozLg8C4Ajs+KkxbJEabDg==" ;
npx:hasSignatureTarget
this:
.
}