[ { "@graph" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ", "@type" : [ "http://www.nanopub.org/nschema#Nanopublication" ], "http://www.nanopub.org/nschema#hasAssertion" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#assertion" } ], "http://www.nanopub.org/nschema#hasProvenance" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#pubinfo" } ] } ], "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#Head" }, { "@graph" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is a - asserts that the thing on the left belongs to the class on the right" } ] }, { "@id" : "http://www.w3.org/2000/01/rdf-schema#label", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "has the name - connects a formal identifier (left) to an informal human-readable name (right)" } ] }, { "@id" : "http://www.w3.org/2000/01/rdf-schema#subClassOf", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is a sub-taxon of - states that all instances of the taxon to the left are also instances of the taxon to the right" } ] }, { "@id" : "http://www.w3.org/2002/07/owl#sameAs", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is exactly the same as" } ] }, { "@id" : "http://www.w3.org/2004/02/skos/core#definition", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is defined as follows: - connects an identifier (left) to a human-readable definition (right)" } ] }, { "@id" : "http://www.w3.org/2004/02/skos/core#relatedMatch", "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "is related to - connects two taxons that are somehow related" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#assertion", "@type" : [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://purl.org/dc/terms/description" : [ { "@value" : "Such a nanopublication defines a new biological taxon, such as a species or a family." } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Defining a new biological taxon" } ], "https://w3id.org/np/o/ntemplate/hasDefaultProvenance" : [ { "@id" : "http://purl.org/np/RALfxe37qzq5rEk6tLLcsSeKtKQZ1FcoHZdf2nYVfU66w" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern" : [ { "@value" : "New ${taxonType}: ${name}" } ], "https://w3id.org/np/o/ntemplate/hasStatement" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st0" }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st1" }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st2" }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st3" }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st4" }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st5" } ], "https://w3id.org/np/o/ntemplate/hasTag" : [ { "@value" : "Biodiversity" } ], "https://w3id.org/np/o/ntemplate/hasTargetNanopubType" : [ { "@id" : "https://w3id.org/kpxl/biodiv/terms/BiodivNanopub" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#definition", "@type" : [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "definition of the taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#name", "@type" : [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the name of the taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#relatedentity", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "URI of a related entity" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "http://purl.org/nanopub/api/find_signed_things?type=http%3A%2F%2Fwww.w3.org%2F2002%2F07%2Fowl%23Class&searchterm=" }, { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" }, { "@value" : "https://www.wikidata.org/w/api.php?action=wbsearchentities&language=en&format=json&limit=5&search=" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#sameentity", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "URI of a taxon that should be treated as fully synonymous" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st0", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxonType" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st1", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#name" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2000/01/rdf-schema#label" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st2", "@type" : [ "http://www.w3.org/1999/02/22-rdf-syntax-ns#Statement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#definition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2004/02/skos/core#definition" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st3", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#supertaxon" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2000/01/rdf-schema#subClassOf" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st4", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#relatedentity" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2004/02/skos/core#relatedMatch" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#st5", "@type" : [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#object" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#sameentity" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate" : [ { "@id" : "http://www.w3.org/2002/07/owl#sameAs" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#supertaxon", "@type" : [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "the URI of the supertaxon" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi" : [ { "@value" : "https://vodex.petapico.org/nidx/query?rows=100&q=label:" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxon", "@type" : [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder", "https://w3id.org/np/o/ntemplate/IntroducedResource" ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "existing taxon identifier, e.g. from ZooBank" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#taxonType", "@type" : [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "https://w3id.org/np/o/ntemplate/hasDefaultValue" : [ { "@id" : "http://purl.obolibrary.org/obo/NCIT_C45293" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom" : [ { "@id" : "https://w3id.org/np/RAuDzWoXFV_PkLWD_u3wzAiALvsAJFAmHSagjBlemiDOE" } ] } ], "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#assertion" }, { "@graph" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#assertion", "http://www.w3.org/ns/prov#wasAttributedTo" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ] } ], "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#provenance" }, { "@graph" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234", "http://xmlns.com/foaf/0.1/name" : [ { "@value" : "Tobias Kuhn" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ", "http://purl.org/dc/terms/created" : [ { "@type" : "http://www.w3.org/2001/XMLSchema#dateTime", "@value" : "2024-07-08T08:04:48.330Z" } ], "http://purl.org/dc/terms/creator" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ], "http://purl.org/dc/terms/license" : [ { "@id" : "https://creativecommons.org/licenses/by/4.0/" } ], "http://purl.org/nanopub/x/supersedes" : [ { "@id" : "https://w3id.org/np/RAfhcZmMYO9TVIwA66DJHMOq1J4xSqXfPfJkJ-kvCeDek" } ], "http://purl.org/nanopub/x/wasCreatedAt" : [ { "@id" : "https://nanodash.knowledgepixels.com/" } ], "http://www.w3.org/2000/01/rdf-schema#label" : [ { "@value" : "Template: Defining a new biological taxon" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate" : [ { "@id" : "http://purl.org/np/RANwQa4ICWS5SOjw7gp99nBpXBasapwtZF1fIM3H2gYTM" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate" : [ { "@id" : "http://purl.org/np/RAA2MfqdBCzmz9yVWjKLXNbyfBNcwsMmOqcNUxkk1maIM" }, { "@id" : "http://purl.org/np/RAh1gm83JiG5M6kDxXhaYT1l49nCzyrckMvTzcPn-iv90" }, { "@id" : "http://purl.org/np/RAjpBMlw3owYhJUBo3DtsuDlXsNAJ8cnGeWAutDVjuAuI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate" : [ { "@id" : "https://w3id.org/np/RALtjkZX1lYrTL2eCZp4VTW6vGGxiDZ-aaU-s1Z0Fcs2I" } ] }, { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#sig", "http://purl.org/nanopub/x/hasAlgorithm" : [ { "@value" : "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey" : [ { "@value" : "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD4Wj537OijfOWVtsHMznuXKISqBhtGDQZfdO6pbb4hg9EHMcUFGTLbWaPrP783PHv8HMAAPjvEkHLaOHMIknqhaIa5236lfBO3r+ljVdYBElBcLvROmwG+ZGtmPNZf7lMhI15xf5TfoaSa84AFRd5J2EXekK6PhaFQhRm1IpSYtwIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature" : [ { "@value" : "8lG3pwoKskJ/IEbNeMRd+RNXG3KuLkHMpE/xpRVzNm9ktMM706ltQxjrGuM0QyvJ4Dp3YjCewB1FXPee9zprAOWjwmwq31w3bmyj3Yf+Rq4EzBG4VTo1FiVlf9l/fL+lZuKcqHoRtR236sa0PVjGFwuKdynW6tzr9zCOo7Gyzp8=" } ], "http://purl.org/nanopub/x/hasSignatureTarget" : [ { "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ" } ], "http://purl.org/nanopub/x/signedBy" : [ { "@id" : "https://orcid.org/0000-0002-1267-0234" } ] } ], "@id" : "https://w3id.org/np/RAQCFxD4pvsZd10IWCUqwWMTbbnj7aOu8Cc83ZRmusqrQ#pubinfo" } ]