https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/Head https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.nanopub.org/nschema#hasAssertion https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.nanopub.org/nschema#hasProvenance https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/provenance https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.nanopub.org/nschema#hasPublicationInfo https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/pubinfo https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://www.nanopub.org/nschema#Nanopublication https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping http://schema.org/description Automated genotyping from genomic sequences using computational methods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://schema.org/DefinedTerm https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping http://www.w3.org/2000/01/rdf-schema#label In Silico Genotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23IS1111Method https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23MLVAMethod https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23MSTMethod https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23PlasmidTypingMethod https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23supportsMethods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23adaAMethod https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoTypingClaim http://schema.org/about https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoGenotyping https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoTypingClaim http://schema.org/text In silico typing can be an indispensable tool for rapid genotyping of Coxiella genomic sequences https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoTypingClaim http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://schema.org/Statement https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23InSilicoTypingClaim https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23evidenceFrom https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23ValidationStudy https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23SequenceQualityClaim http://schema.org/text The strength of in silico typing methods relies significantly on the quality of the input sequence https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23SequenceQualityClaim http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://schema.org/Statement https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23SequenceQualityClaim https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23evidenceFrom https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/RAnh-o0GrvBfvoyiruq9UnbZOaNcHbue5O-FU6300R_Jg%23ValidationStudy https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/provenance https://doi.org/10.1128/mSystems.00403-21 http://purl.org/ontology/bibo/doi 10.1128/mSystems.00403-21 https://doi.org/10.1128/mSystems.00403-21 http://schema.org/datePublished 2021 https://doi.org/10.1128/mSystems.00403-21 http://schema.org/name CoxBase: an Online Platform for Epidemiological Surveillance, Visualization, Analysis, and Typing of Coxiella burnetii Genomic Sequences https://doi.org/10.1128/mSystems.00403-21 http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/ontology/bibo/AcademicArticle https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-1481-2996 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-2498-4951 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0002-2864-3820 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0003-0913-194X https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0003-1886-7625 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasAttributedTo https://orcid.org/0000-0003-3012-2626 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/assertion http://www.w3.org/ns/prov#wasDerivedFrom https://doi.org/10.1128/mSystems.00403-21 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/pubinfo https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://purl.org/dc/terms/creator https://orcid.org/0009-0005-7752-8203 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://purl.org/dc/terms/license https://creativecommons.org/licenses/by/4.0/ https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://purl.org/nanopub/x/signedBy https://orcid.org/0009-0005-7752-8203 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://purl.org/nanopub/x/wasCreatedAt https://nanodash.knowledgepixels.com/ https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://purl.org/pav/authoredBy https://orcid.org/0009-0005-7752-8203 https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.w3.org/1999/02/22-rdf-syntax-ns#type http://purl.org/nanopub/x/ExampleNanopub https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.w3.org/2000/01/rdf-schema#comment Nanopublication describing the utility of in silico genotyping methods for rapid genotyping of Coxiella burnetii genomic sequences, covering MLVA, MST, IS1111, adaA and plasmid typing methods https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY http://www.w3.org/2000/01/rdf-schema#label In Silico Genotyping of Coxiella burnetii https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/sig http://purl.org/nanopub/x/hasAlgorithm RSA https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/sig http://purl.org/nanopub/x/hasPublicKey MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAoSR/rqhnkTPQO8u4l2JQAemJo5cN83rT54nA5NXHUqaeu26bEjT/rsX1PCVBhhJ3cV2uu4wjI0NfcVaKPKmODSf6p579tdOykOnjbWLbxxPMe5DC5eV1ThMHsFsNU/6vCYIfS00E7wre7fnFYz7FAG7v1MZEyWeSXsHgk9jHoqQQDPqup5PHReKp1dd6J0Nht/OfSYnUancKAgIFyPhkTlThsLK5xSNyNEgiTR7pwkP5pGq2AnD6bPw4G3kiPnIpIGZNsaeIOvhn64gwbrtoJVdoun/namw6FQ7StEC5km/0evaBZc4qIextwO/s32Wru77ukblJ0Xi/YzbC0iLuIQIDAQAB https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/sig http://purl.org/nanopub/x/hasSignature cjosGENgZ2zA/dhfOTseHaUCSh7V7p3TbzzphPapEHL78uvj/9s6F00VfddYC61hD0cggN9LzKM0Ho1aKrlLR4JxuHh44fnaq4A/RQJX6EFcaE1kchlKxFZsqnAS5VAe3OzITHxX2ba65rWlgHcV0KR/bQtjG+tvY5JjCnd1TLeMCms9atWcvShB8hYry2SLMQ0U3Dtbt3ajqMSBliZw6DM8j2uWjbprur9WB5cKlMJpgmXk655B/rLuLRzppo/zbBk1kR6KtFGPamO9Jj51WYhS2m8IIhHwasFVLf7+UjMsguDGCYmXdHl6Nt6yLXW534O1q3J5bY1zfXIL9QKjGQ== https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY/sig http://purl.org/nanopub/x/hasSignatureTarget https://w3id.org/np/RAJrOEflQ_Bm3nEfar-7EoKKbBFCdtieMsV0Gno_pdEHY