<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.nanopub.org/nschema#hasAssertion> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/Head> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.nanopub.org/nschema#hasProvenance> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/Head> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.nanopub.org/nschema#hasPublicationInfo> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/Head> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.nanopub.org/nschema#Nanopublication> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/Head> .
<http://purl.org/coloc-seq/kinetics-model> <http://schema.org/formula> "f(A) = (1 - P0) * exp(-k'i * A) + P0"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/kinetics-model> <http://schema.org/name> "CoLoC-seq Kinetics Model"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/kinetics-model> <http://semanticscience.org/resource/SIO_000211> "P0"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/kinetics-model> <http://semanticscience.org/resource/SIO_000211> "k'i"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/kinetics-model> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://schema.org/Thing> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/kinetics-model> <http://www.w3.org/2000/01/rdf-schema#comment> "P0 represents protected RNA pool proportion; k'i represents digestion rate constant"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://edamontology.org/has_function> <http://edamontology.org/operation_3680> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://schema.org/applicationArea> "Extracellular vesicle characterization"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://schema.org/applicationArea> "Mitochondrial transcriptomics"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://schema.org/applicationArea> "Organelle RNA localisation"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://schema.org/description> "Controlled Level of Contamination coupled to deep sequencing - a novel subcellular transcriptomics approach"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://schema.org/name> "CoLoC-seq"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://semanticscience.org/resource/SIO_000135> <http://purl.org/coloc-seq/kinetics-model> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://semanticscience.org/resource/SIO_000135> <http://purl.org/coloc-seq/mock-coloc-experiment> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://edamontology.org/data_0957> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://schema.org/Thing> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/method> <http://www.w3.org/2000/01/rdf-schema#comment> "Leverages classical enzymatic kinetics to track depletion dynamics of transcripts using RNase gradients"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/mock-coloc-experiment> <http://schema.org/description> "Control experiment with detergent-permeabilized membranes to detect false positives"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/mock-coloc-experiment> <http://schema.org/name> "Mock CoLoC-seq"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/mock-coloc-experiment> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://schema.org/Thing> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<http://purl.org/coloc-seq/mock-coloc-experiment> <http://www.w3.org/2000/01/rdf-schema#comment> "Distinguishes genuine protection from intrinsic RNase resistance"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://schema.org/about> <https://doi.org/10.1093/nar/gkac1205> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://schema.org/text> "CoLoC-seq is a novel subcellular transcriptomics approach that uses enzymatic kinetics to distinguish genuine organellar resident RNAs from surface-attached contaminants."@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/o/ntemplate/AIDA-Sentence> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.w3.org/2000/01/rdf-schema#seeAlso> <http://edamontology.org/operation_3680> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> .
<https://doi.org/10.1093/nar/gkac1205> <http://purl.org/ontology/bibo/doi> "10.1093/nar/gkac1205" <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://doi.org/10.1093/nar/gkac1205> <http://schema.org/datePublished> "2023"^^<http://www.w3.org/2001/XMLSchema#gYear> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://doi.org/10.1093/nar/gkac1205> <http://schema.org/isPartOf> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/__1> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://doi.org/10.1093/nar/gkac1205> <http://schema.org/name> "CoLoC-seq probes the global topology of organelle transcriptomes"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://doi.org/10.1093/nar/gkac1205> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://purl.org/ontology/bibo/AcademicArticle> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://doi.org/10.1093/nar/gkac1205> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://schema.org/ScholarlyArticle> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
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<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/__1> <http://schema.org/name> "Nucleic Acids Research"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/__1> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://schema.org/Periodical> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> <http://www.w3.org/ns/prov#wasAttributedTo> <https://orcid.org/0000-0001-8763-6703> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> <http://www.w3.org/ns/prov#wasAttributedTo> <https://orcid.org/0000-0002-1481-2996> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> <http://www.w3.org/ns/prov#wasAttributedTo> <https://orcid.org/0000-0002-9142-7979> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/assertion> <http://www.w3.org/ns/prov#wasDerivedFrom> <https://doi.org/10.1093/nar/gkac1205> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/provenance> .
<https://orcid.org/0009-0005-7752-8203> <http://xmlns.com/foaf/0.1/name> "Tiado Kollender" <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> .
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<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://purl.org/nanopub/x/wasCreatedFromPubinfoTemplate> <https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> .
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<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://purl.org/pav/createdBy> <https://orcid.org/0009-0005-7752-8203> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> .
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<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <http://www.w3.org/2000/01/rdf-schema#label> "Nanopublication: CoLoC-seq method for subcellular RNA localisation"@en <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> .
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<https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/sig> <http://purl.org/nanopub/x/hasSignatureTarget> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU> <https://w3id.org/np/RA4TkcJzz1U1F2f3Mh29t1N0eYXyPFltTxbk9t0Y_v-AU/pubinfo> .